Zeebo F.C. Super League is a soccer game with several rules bended to give the game a more arcadey approach. It features teams of 5 players in non-stop matches with no fouls and no balls out of play. Players can run, dribble, pass, shoot and hit the opponents. When shooting, the longer the button is pressed, the stronger the kick is; when passing, the player can choose to make it a low or an aerial pass.
When assembling a team, the player can make a new captain or import one of his/her Zeeboids. If previously trained on Zeebo F.C. Foot Camp, the Zeeboid will retain its attribute levels from that game. By using the Zeeboid the player also participates on an online ranking and can keep track of achievements unlocked during the game. The team uniform and name can also be customized, and winning games develop the team's attributes (strength, reflexes, precision and control).
The player can select the length of games (with 2, 4 or 8 minutes) and if special powers will or won't be allowed. There are five special powers available:
- Mega-Ball: the ball knocks down everyone in its way.
- Wall: a wall is put in front of the goal, stopping any ball, even the Mega-Ball.
- Giant: the character being controlled by the player grows into a giant, being immune to hits or stunning (even by bombs).
- Crazy Chicken: a crazy chicken invades the field and takes the ball to the opponent's field.
- Bomb-Ball: the ball turns into a bomb, stunning the nearby players.
The game features 3 game modes:
- Campaign: in this mode the player develops the team's attributes and unlocks new opponents as he/she advances in game. There are 5 different leagues in this mode, with 5 stadiums and 5 final bosses (Aztec, Pirate, Zombie, Robot and Boy). The player wins trophies for each league won. There are 3 difficulty levels in this mode: Pro, Champions and Stars.
- Tournament: the player can arrange a tournament with 4, 8 or 16 teams.
- Quick play: a quick game with any of the available teams.
The game can be played in single player mode, two players in opposite teams or two players in the same team.